Sign up for Biomarker Discovery in Prostate Cancer with Metabolomics Webinar on July 14

Our global metabolomics platform provides the  broadest view of polar and lipid metabolites from endogenous and exogenous (food, drugs, environment) sources. Metabolite profiling is performed using multiple complementary LC-MS assays to deliver the highest quality untargeted metabolomics data. We use advanced computation to remove all noise and irrelevant signals and extract metabolite signals from your raw data.

Finally,  our computational pipeline to normalizes and applies rigorous statistical and machine learning methods to make identifications as we provide an unbiased, comprehensive view of metabolism.

Panome Bio’s global metabolomics platform boasts extreme versatility to meet your research needs with many applications including biomarker development, epidemiology and population health, patient stratification, mechanistic exploration of drug candidates, longitudinal studies and more.

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Unlock a new realm of data from your samples with Panome Bio’s Next-Generation Metabolomics®.

Our global, untargeted metabolomics platform consists of 4 complementary LC-MS assays that cover a wide range of metabolites, from polar compounds to lipids. Our optimized LC-MS methods combined with our data analysis pipeline provides a comprehensive small molecule profile.

Advantages of Next-Generation Metabolomics

  • Panome Bio’s discovery power is not limited by a library or panel.
  • The Next-Generation Metabolomics platform uses optimized LC/MS methods and a proprietary computational pipeline that translates raw data into confident identifications of metabolites by matching signals to a comprehensive small molecule database of >175,000 compounds.
  • Confident results: Our algorithms remove non-biological and redundant signals found in untargeted data sets such that we only report known and novel metabolites.
  • Data delivered in as little as 4 weeks.

Sample Requirements

  • Our platform analyzes diverse sample types from various species with just 50 uL of biofluid, 2 mg of tissue, or 1 million cells.
  • We provide clear instructions for sample collection, handling, storage, and shipment.
  • We suggest for all sample types flash freeze as quickly as possible following collection to arrest metabolic activity.

See how Next-Generation Metabolomics
is applied to Colorectal Cancer

Download Data Report

Discover our global lipidomics screen, part of Panome Bio’s Next-Generation Metabolomics® platform.

Discover our global lipidomics screen, part of Panome Bio’s Next-Generation Metabolomics® platform. The lipidomics screen can be accessed as a standalone lipidomics offering. Using advanced LC/MS and computational methods, we deliver the highest quality lipidomics data. Our lipid assays offer broad assessment of major biological lipid classes, including ceramides, glycerophosphocholines, and sphingomyelins, amongst others. Our expert team members build intensive biological interpretations from the comprehensive view of lipid metabolism, ensuring you gain the most interpretable insights.

Advantages of Next-Generation Lipidomics

  • Panome Bio’s discovery power is not limited by a library or panel.
  • The Next-Generation Lipidomics platform uses optimized LC/MS methods and a proprietary computational pipeline that translates raw data into confident identifications of metabolites by matching signals to a comprehensive small molecule database of >175,000 compounds.
  • Our algorithms remove non-biological and redundant signals found in untargeted data sets such that we only report known and novel metabolites.
  • Data delivered in as little as 4 weeks.

Sample Requirements

  • Our platform analyzes diverse sample types from various species with just 50 uL of biofluid, 2 mg of tissue, or 1 million cells.
  • We provide clear instructions for sample collection, handling, storage, and shipment.
  • We suggest for all sample types flash freeze as quickly as possible following collection to arrest metabolic activity.

See how Next-Generation Metabolomics
is applied to Colorectal Cancer

Download Data Report

Metabolic flux analysis tracks how metabolites move through pathways, revealing critical insights into disease mechanisms and treatment development

Metabolic flux analysis tracks how metabolites move through pathways, revealing critical insights into disease mechanisms and drug development. Using stable isotope labeling experiments, we uncover how fluxes—affected by transcriptional, translational, and post-translational changes—are disrupted in disease states. Our experts will guide you in choosing the ideal stable isotope precursor and designing optimal labeling conditions to maximize your results. Our flux experiments can cover:

  • Pentose phosphate pathway
  • Tricarboxylic Acid Cycle & Reductive Carboxylation
  • Fatty Acid Synthesis & Pyruvate Carboxylase
  • Glycolysis
  • Bioprocessing

Advantages of our Metabolic Flux Offering

  • Metabolic flux information helps researchers understand how compounds are are transformed through pathways. This reveals how systems respond to changes in their environment, treatment, or genetic modifications.
  • Helps identify rate-limiting steps in metabolic networks, offering insights for potential therapeutic targets or metabolic engineering.
  • Integration with Multi-Omics Data: Complements genomic, transcriptomic, and proteomic data, enabling a more comprehensive understanding of the cellular metabolic state.
  • Metabolic flux experiments are not only useful in disease pathogenesis and drug target discovery, it is a crucial concept in bioprocessing. Understanding metabolic flux can significantly impact bioprocessing by enhancing product yield and  optimizing substrate utilization.

See how metabolic flux was used
to investigate nutrient contribution in cell lines

Download Data Report

Focused metabolite panels to take research from discovery to validation

Targeted metabolomics is focused on measuring specific set of metabolites within a biological sample. By honing in on these key molecules, researchers can gain valuable insights into metabolic pathways, disease states, and the effects of treatments. Panome Bio’s targeted metabolomics services provide a comprehensive approach to understanding the complex biochemical processes that underlie health and disease.

Targeted Bile Acids

  • Up to 68 bile acids detected
  • Data analysis and QC
  • Complete workflow – from sample prep to data delivery
Targeted Short Chain Fatty Acids, Ketones, Branched-Chain Amino Acids

  • Up to 18 SCFAs, Ketones, & BCAAs detected
  • Data analysis and QC
  • Complete workflow – from sample prep to data delivery
Targeted Bile Acids
  • Primary Bile Acids
    • HumanCholic acid (CA); Chenodeoxycholic acid (CDCA); Glycine-CA; Glycine-CDCA; Taurine-CA
    • Mousealpha/beta-Muricholic acid (a/b-MCA); omega-Muricholic acid (o-MCA); Gly-a/b-MCA; Taur-a/b-MCA
  • Secondary Bile Acids
    • Host-ConjugatedDeoxycholic acid (DCA); Lithocholic acid (LCA)
    • FreeGlycine-DCA; Glycine-LCA
  • Bile Acid Amidates
    • BackboneGroup
    • Chenodeoxycholic acidCysteine; Glutamic acid; Histidine; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
    • Cholic acidAlanine; Arginine; Glutamic acid; Isoleucine; Leucine; Phenylalanine; Tryptophan; Tyrosine
    • Deoxycholic acidGlutamic acid; Isoleucine; Leucine; Lysine; Methionine; Tryptophan; Tyrosine
    • Hyocholic acidGlutamic acid
    • Hyodeoxycholic acidGlutamic acid; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
    • Ursodeoxycholic acidGlutamic acid; Glutamine; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
  • Additional Bile Acids
    • Hyocholic acid; Hyodeoxycholic acid; Ursodeoxycholic acid ; 3-Ketocholanic acid; Lithocholenic acid; 3b-Hydroxy-5-cholenoic acid; 8(14),(5β)-Cholenic acid-3α, 12α-diol; 5-β-Cholanic acid-3α-ol-6-one; Isolithocholic acid; Isodeoxycholic acid; 9(11), (5β)-Cholenic acid-3α-ol-12-one; 5α-Cholanic acid-3, 6-dione; 3,7-Dioxocholanic acid; 3,6-Dioxocholanic acid

Targeted SCFAs, Ketones, BCAAs
  • Targeted Short Chain Fatty Acids, Ketones, Branch-Chained Amino Acids
    • Butyrate, Isobutyrate
    • 2-Hydroxybutryate (2-HB), 3-Hydroxybutryate (3-HB), 4-Hydroxybutryate (4-HB), 3-Hydroxyisobutyrate (3-HIB), 2-Methylbutyrate
    • Caproate, Isocaproate, alpha-Ketoisocaproate (a-KIC)
    • Valerate, Isovalerate, alpha-Ketoisovalerate (a-KIV), alpha-Ketomethylvalerate (a-KMV)
    • Acetate, Acetone, Acetoacetate (AcAc)
    • Propionate

Panome Bio is providing metabolic profiling with absolute quantitation using a metabolite panel of over 1,000 metabolites

Panome Bio offers metabolic profiling with absolute quantitation with a metabolite panel of over 1,000 metabolites. Do you have specific analytes of interest? Panome Bio can also develop custom metabolomics panels to meet your research needs.
Researchers can leverage our expertise and advanced technology to leverage targeted metabolomics as they uncover biomarkers, understand metabolic pathways, and drive personalized medicine without the need for in-house capabilities. This service ensures high accuracy, reproducibility, and minimal sample volume requirements, making it an invaluable resource for advancing scientific and clinical research.

Advantages of Absolute Quantitation in Metabolomics

  • Results are quantified based on internal standards and calibration curves
  • Absolute quantitation can be useful for further validation.
107 Small Molecules (14 classes)
  • 107 Small Molecules (14 classes)
    • Alkaloids (1)
    • Amino oxides (1)
    • Amino acids (20)
    • Amino acid related (30)
    • Bile acids (14)
    • Biogenic amines (9)
    • Carbohydrates and related (1)
    • Carboxylic acids (7)
    • Cresols (1)
    • Fatty acids (12)
    • Hormones and related (4)
    • Indoles and derivates (4)
    • Nucleobases and related (2)
    • Vitamins and cofactors (1)

912 Lipids (25 classes)
  • 912 Lipids (25 classes)
    • Acylcarnitines (40)
    • Phosphatidylcholines (78)
    • Lysophosphatidylcholines (12)
    • Sphingomyelins (15)
    • Cholesteryl esters (22)
    • Ceramides (29)
    • Dihydroceramides (8)
    • Hexosylceramides (19)
    • Dihexosylceramides (9)
    • Trihexosylceramides (6)
    • Diglycerides (44)
    • Triglycerides (242)
    • Phosphatidic acids (41)
    • Lysophosphatidic acids (8)
    • Phosphatidylethanolamines (95)
    • Lysophosphatidylethanolamines (43)
    • PhosphatidyIglycerols (64)
    • Lysophophatidylglycerols (10)
    • Phosphatidylinositols (53)
    • Lysophosphatidylinositols (16)
    • Phosphatidylserines (18)
    • Lysophosphatidy|serines (12)
    • Sphinganines and sphingosines (8)
    • Sphinganine and sphingosine phosphates (8)
    • Monoglycerides (12)

See how quantitative, targeted metabolimics was
used in a colorectal cancer study

Download Data Report

Panome Bio Provides Advanced Microbiome Analysis with Next-Generation Metabolomics – Deepen Insights with Bile Acids, SCFAs, & More

The microbiome consists of diverse bacteria which play an important role in immune function and protecting against infections, chronic inflammatory diseases, and cancer. As the microbiome is linked to immune function, metabolomics studies can be used for biomarker discovery and development.
 
Panome Bio offers a comprehensive microbiome function analysis that measures bile acids and short chain fatty acids (SCFAs), plus a global metabolomics screen for the broadest coverage and advanced understanding of the role of the microbiome in health and disease. Panome Bio also offers a multi-omics approach through integration of customer-provided microbiome sequencing data with metabolomics. Integration of transcriptomics and metabolomics data can be used to identify gene-metabolite relationships, understand metabolic pathways, understand cellular response and mechanism of disease, and discover novel biomarkers and drug targets.

Focused Assay: Bile Acids

  • Gain insights into microbial metabolism of bile acids, dietary compounds, flavonoids, steroids, and other lipids, allowing for an understanding of food, nutrition, and overall gut health.
  • Detect up to 68 primary, secondary, and microbially-conjugated Bile acids
  • This method also measures different forms of lipid-soluble vitamins (A,D,E,K)
Focused Assay: Short Chain Fatty Acids (SCFAs), Ketones, Branched-Chain Amino Acids (BCAAs)

  • Understand overall gut microbiome structure, health, and homeostasis and comprehend intestinal barrier function
  • Measure up to 18 derivatized SCFAs, ketones, and BCAAs
Bile Acid
  • Primary Bile Acids
    • HumanCholic acid (CA); Chenodeoxycholic acid (CDCA); Glycine-CA; Glycine-CDCA; Taurine-CA
    • Mousealpha/beta-Muricholic acid (a/b-MCA); omega-Muricholic acid (o-MCA); Gly-a/b-MCA; Taur-a/b-MCA
  • Secondary Bile Acids
    • Host-ConjugatedDeoxycholic acid (DCA); Lithocholic acid (LCA)
    • FreeGlycine-DCA; Glycine-LCA
  • Bile Acid Amidates
    • BackboneGroup
    • Chenodeoxycholic acidCysteine; Glutamic acid; Histidine; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
    • Cholic acidAlanine; Arginine; Glutamic acid; Isoleucine; Leucine; Phenylalanine; Tryptophan; Tyrosine
    • Deoxycholic acidGlutamic acid; Isoleucine; Leucine; Lysine; Methionine; Tryptophan; Tyrosine
    • Hyocholic acidGlutamic acid
    • Hyodeoxycholic acidGlutamic acid; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
    • Ursodeoxycholic acidGlutamic acid; Glutamine; Isoleucine; Leucine; Lysine; Methionine; Phenylalanine; Tryptophan; Tyrosine
  • Additional Bile Acids
    • Hyocholic acid; Hyodeoxycholic acid; Ursodeoxycholic acid ; 3-Ketocholanic acid; Lithocholenic acid; 3b-Hydroxy-5-cholenoic acid; 8(14),(5β)-Cholenic acid-3α, 12α-diol; 5-β-Cholanic acid-3α-ol-6-one; Isolithocholic acid; Isodeoxycholic acid; 9(11), (5β)-Cholenic acid-3α-ol-12-one; 5α-Cholanic acid-3, 6-dione; 3,7-Dioxocholanic acid; 3,6-Dioxocholanic acid

SCFAs, Ketones, & BCAAs
  • Short Chain Fatty Acids, Ketones, & Branched-Chain Amino Acids
    • Butyrate, Isobutyrate
    • 2-Hydroxybutryate (2-HB), 3-Hydroxybutryate (3-HB), 4-Hydroxybutryate (4-HB), 3-Hydroxyisobutyrate (3-HIB), 2-Methylbutyrate
    • Caproate, Isocaproate, alpha-Ketoisocaproate (a-KIC)
    • Valerate, Isovalerate, alpha-Ketoisovalerate (a-KIV), alpha-Ketomethylvalerate (a-KMV)
    • Acetate, Acetone, Acetoacetate (AcAc)
    • Propionate

Global Microbiome Metabolomics

  • Be informed of general metabolism in a given sample including established energy-generating pathways
  • Important molecules measured include amino acids, sugars, nucleotides, nucleosides, and energy metabolites, among many others.
Sample Requirements

  • Most common sample types include fecal samples, urine, serum/plasma and liver, kidney, intestine (small and large), gallbladder, cecum samples.
  • Many other sample types can be accommodated.
  • Amounts required per assay: 5 mg wet weight of tissue, 30 mg wet weight for fecal samples (2-3 mouse pellets), 50 uL of biofluid, fecal slurry (variable, 30 mg)

See how microbiome function analysis was
used to investigate gut flora-depleted mice

Download Data Report

Let’s get started!

Discover the unparalleled advantages of Panome Bio’s advanced metabolomics technology. Your research project is unique and we can provide a custom experimental design to meet your goals. Whether you are investigating a specific disease model, elucidating biomarkers for diagnostics, or evaluating therapeutic targets, Panome Bio will work with you to design a tailored approach to best suit your research goals.

Ready to elevate your research? Connect with us today and transform your research with metabolomics.

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